Information for 13-CACATCAGTTGCC (Motif 25)

A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C
Reverse Opposite:
C A T G A C T G A G T C C G T A C G T A A T G C A C G T A C T G C T G A A C G T A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.3 +/- 23.6bp
Average Position of motif in Background57.8 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACATCAGTTGCC-
-CCACCTGTTGCAT
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T
A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACATCAGTTGCC-
ANCCACCTGTTGCNC
 A C G T A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CACATCAGTTGCC--
----NNACTTGCCTT
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACATCAGTTGCC----
CTCAGCAGCTGCTACTG
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACATCAGTTGCC--
CACGGCAGTTGGTNN
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACATCAGTTGCC--
GAAGAACAGGTGTCCG
 A C G T A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACATCAGTTGCC
---AGCAGCTGCT
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CACATCAGTTGCC
---ACCACGTG--
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C
A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACATCAGTTGCC
-ACTACAATTCCC
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CACATCAGTTGCC----
-----CTGTTGCTAGGS
 A G T C C G T A G T A C G T C A A G C T A G T C G T C A A T C G A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G