Information for 10-TTTWAAAAGCWCCAST (Motif 14)

C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
Reverse Opposite:
G C T A T A G C A G C T A C T G A C T G G C T A A C T G A T G C A C G T C G A T C G A T A C G T C G T A C G T A C G T A C G T A
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 30.6bp
Average Position of motif in Background41.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTWAAAAGCWCCAST
NTTTTACGAGN------
 A C G T C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTTWAAAAGCWCCAST
TTTTATTRGN------
 C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTWAAAAGCWCCAST
NAATTTTACGAGNTNN---
 A C G T A C G T A C G T C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTTWAAAAGCWCCAST
GNCTATAAAAGG------
 A C G T A C G T C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTTWAAAAGCWCCAST--
-CATAAGACCACCATTAC
 C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T A C G T A C G T
A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TTTWAAAAGCWCCAST
--------GCTCCG--
 C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTWAAAAGCWCCAST
TTTAATTGCN------
 C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTTWAAAAGCWCCAST
NAATTTTATTACCTNN---
 A C G T A C G T A C G T C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTTWAAAAGCWCCAST
ANATTTTACGAGNNNN---
 A C G T A C G T A C G T C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TTTWAAAAGCWCCAST--
--AAAATGGCGCCATTTT
 C G A T A C G T G A C T C G A T C G T A G C T A C G T A C G T A A T C G A G T C C G A T A G T C A G T C C T G A A T C G C A G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T