Information for 9-TTCACAGCAGKGAADC (Motif 13)

C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
Reverse Opposite:
C A T G G T A C C G A T G A C T A G T C G T C A A G T C C G A T A C T G A G T C C G A T A C T G A C G T A C T G C G T A G C T A
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.752
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.4 +/- 11.9bp
Average Position of motif in Background15.7 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TTCACAGCAGKGAADC
--CACAGCAGGGGG--
 C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTCACAGCAGKGAADC
CCACACAGCAGGAGA--
 A C G T C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTCACAGCAGKGAADC
CCACACAGCAGGAGA--
 A C G T C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTCACAGCAGKGAADC
GAGCACAGCAGGACA--
 A C G T C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTCACAGCAGKGAADC
-DCHCAGCAGGRGGCC
 C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCACAGCAGKGAADC
-DCTCAGCAGG-----
 C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCACAGCAGKGAADC
AAATCACAGCA-------
 A C G T A C G T C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTCACAGCAGKGAADC
--CACAGN--------
 C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCACAGCAGKGAADC
AAATCACTGC--------
 A C G T A C G T C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTCACAGCAGKGAADC
GATATTGACAGCTGCGT---
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C G T C A G T A C C G T A A C T G A G T C C G T A T A C G C A G T A C T G C G T A C G T A C A G T G T A C
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T A C G T