Information for 7-GCTTKGTRTGRATTTG (Motif 11)

A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
Reverse Opposite:
T A G C C G T A C G T A T C G A A C G T A G T C A G T C C G T A G A T C C G T A A G T C G T A C T G C A C G T A A C T G A G T C
p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 27.1bp
Average Position of motif in Background43.2 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTTKGTRTGRATTTG
CCATTGTATGCAAAT-
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCTTKGTRTGRATTTG-
------TGTGGATTNNN
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCTTKGTRTGRATTTG
----NNTGTGGATTSS
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTTKGTRTGRATTTG---
--NTTNTATGAATGTGNNC
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTTKGTRTGRATTTG
CCWTTGTYYB------
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTTKGTRTGRATTTG
-CTTTGT---------
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTTKGTRTGRATTTG-
--TNAGTTTCGATTTTN
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G A C G T
A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTTKGTRTGRATTTG
--TAGGTGTGAAG---
 A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTTKGTRTGRATTTG
GAAAAGGTGTGAAAATT
 A C G T A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTTKGTRTGRATTTG
TGCTTTCTAGGAATTCA
 A C G T A C T G A G T C C G A T A C G T C A T G A C T G A C G T C T A G A C G T A C T G C T A G C G T A A C G T C G A T A C G T A C T G
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A