p-value: | 1e-6 |
log p-value: | -1.558e+01 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.63% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 60.8 +/- 26.5bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.67 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0185.1_Tcf1_2/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCCCTAATCCAG---- ---NNTAATCCNGNCNN |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG ---GCTAATCC-- |
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PITX3/MA0714.1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG ---CTTAATCCC- |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG ----TTAATCCC- |
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PB0092.1_Zbtb7b_1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCCCCTAATCCAG AAGCCCCCCAAAAAT-- |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCCCCTAATCCAG ----YTAATCCY- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG ---NYTAATCCYB |
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GSC/MA0648.1/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG ---GCTAATCCCC |
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG -----TAATCCCN |
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OTX2/MA0712.1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCCCCTAATCCAG ----TTAATCCT- |
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