Information for 5-TTCTGTATVATTC (Motif 12)

A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
Reverse Opposite:
A T C G C G T A G T C A A C G T A C T G C T G A A G C T C G T A A G T C C G T A C T A G C G T A G T C A
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.796
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 24.2bp
Average Position of motif in Background41.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTCTGTATVATTC-
--ATGCATAATTCA
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C A C G T
A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTCTGTATVATTC
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTGTATVATTC
TTCTAGAACGTTC
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTGTATVATTC
TTCTAGAACGTTC
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCTGTATVATTC
TTCTAGAACGTTC
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCTGTATVATTC--
TTCTAGAABNTTCTA
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTCTGTATVATTC-
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTCTGTATVATTC
-AATGTATCAAT-
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTCTGTATVATTC----
-TATTGGTAATTACCTT
 A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTCTGTATVATTC
ANTCCTTTGTCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C G T C T G A A G C T T A G C C G T A A C G T A C G T T A G C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T