Information for 5-CAGTCTCACTGAC (Motif 14)

A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.929e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 3.8bp
Average Position of motif in Background80.4 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGTCTCACTGAC----
-TGACCCAGTGACCTAC
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTCTCACTGAC---
-GGTCANNGTGACCTN
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGTCTCACTGAC
-ACTTTCACTTTC
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTCTCACTGAC
-ASTTTCACTTCC
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCTCACTGAC-
TCACTTTCACTTTCN
 A C G T A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGTCTCACTGAC-----
--CAATCACTGGCAGAAT
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGTCTCACTGAC
-ASTTTCASTTYC
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGTCTCACTGAC---
----BTGABTGACAGS
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGTCTCACTGAC
-AGTTTCAGTTTC
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGTCTCACTGAC--
AGGNCANNGTGACCT
 A G T C C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T