Information for 5-GYCGMTACTT (Motif 12)

A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G C T G C T A A C T G T G A C C A T G C T G A A G T C
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.761
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif42.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.9 +/- 31.8bp
Average Position of motif in Background51.8 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GYCGMTACTT----
AGATGCTRCTRCCHT
 A C G T A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GYCGMTACTT-----
ACTTGCTACCTACACC
 A C G T A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GYCGMTACTT--
------GCTTCC
 A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GYCGMTACTT-----
ACATGCTACCTAATAC
 A C G T A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GYCGMTACTT
AGCAGCTGCT-
 A C G T A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GYCGMTACTT----
----AACCTTATAT
 A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GYCGMTACTT---
----CCACTTGAA
 A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GYCGMTACTT-
----AAGCTTG
 A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GYCGMTACTT--
---ACCACTTAA
 A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GYCGMTACTT--
---ACCACTTAA
 A C T G A G C T G T A C A C T G G T A C C G A T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A