Information for 2-CSSTGGGAAG (Motif 9)

A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G
Reverse Opposite:
A G T C G C A T C A G T A G T C G T A C G T A C G T C A T A C G A T G C T A C G
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.495
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif989.8
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets54.0 +/- 28.1bp
Average Position of motif in Background50.1 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:CSSTGGGAAG-
-CSTGGGAAAD
 A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CSSTGGGAAG
WDNCTGGGCA-
 A C G T A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CSSTGGGAAG-
-----NGAAGC
 A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CSSTGGGAAG
TAGGTGTGAAG
 A C G T A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CSSTGGGAAG-
-GGCGGGAARN
 A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CSSTGGGAAG-----
TATTATGGGATGGATAA
 A C G T A C G T A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CSSTGGGAAG----
NNNNGGGGGAAGANGG
 A C G T A C G T A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T A C G T A C G T A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CSSTGGGAAG-
GGGCGGGAAGG
 A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CSSTGGGAAG-
RGSMTBCTGGGAAAT
 A C G T A C G T A C G T A C G T A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CSSTGGGAAG
AAGGTGTGAA-
 A C G T A T G C T A C G A T G C C A G T C A T G C A T G T C A G G T C A C G T A T C A G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T