Information for 5-AGCCAAAAGCAGT (Motif 6)

G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A G C T A C T G T A G C C G A T A C G T A C G T A C G T A C T G A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.852
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.3 +/- 19.6bp
Average Position of motif in Background52.0 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGCCAAAAGCAGT---
----AAAACCGGTTTT
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGCCAAAAGCAGT--
-----AAACCGGTTT
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCCAAAAGCAGT------
--NNNANTGCAGTGCNNTT
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Tcf21/MA0832.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCCAAAAGCAGT---
--NCAACAGCTGTTGC
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCCAAAAGCAGT
TGCCAA-------
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCCAAAAGCAGT
CGTGCCAAG------
 A C G T A C G T G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAAAAGCAGT
AAAACAAAGG----
 A C G T G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGCCAAAAGCAGT---
--AAAAAATCAATAAT
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

MSC/MA0665.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCCAAAAGCAGT-
----AACAGCTGTT
 G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAAAAGCAGT
BCAGACWA-------
 A C G T A C G T G T C A A C T G G T A C G T A C C G T A C G T A C G T A G C T A A T C G A G T C C T G A A C T G A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T