Information for 11-GCTCCGACAG (Motif 22)

A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A G T C A C T G A C T G C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.4 +/- 17.2bp
Average Position of motif in Background35.2 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCTCCGACAG
GCTCCG----
 A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCTCCGACAG-
-----CACAGN
 A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCCGACAG
---TTGACAG
 A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGACAG
NGCTN------
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTCCGACAG-
---TTGACAGC
 A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTCCGACAG
--CCAGACAG
 A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGACAG-
GGCTCYAKCAYC
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTCCGACAG--
GCTCCGCCCMCY
 A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGACAG-----
ATTTACGACAAATAGC
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTCCGACAG----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G