Information for 2-CACCGCCCGCTTT (Motif 2)

A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A A C T G A G T C A C T G A C T G A C T G A G T C C T A G A T C G A C G T A C T G
p-value:1e-13
log p-value:-3.063e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 23.5bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACCGCCCGCTTT--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACCGCCCGCTTT
GCTCCGCCCMCY--
 A C G T A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACCGCCCGCTTT--
GACCCCCCGCTGCGC
 A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACCGCCCGCTTT-
GACCCCCCGCTGTG
 A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACCGCCCGCTTT
CAACGTCCGCGG-
 A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACCGCCCGCTTT
---TACCCGCATN
 A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACCGCCCGCTTT
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACCGCCCGCTTT---
TCGTACCCGCATCATT
 A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACCGCCCGCTTT
GCCMCGCCCMCY--
 A C G T A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACCGCCCGCTTT
NAGCCCCGCCCCCN--
 A C G T A C G T A C G T A G T C C G T A A T G C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A G C T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T