Information for 8-CAGGGACCGA (Motif 19)

A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A
Reverse Opposite:
C G A T A T G C A T C G T C A G A G C T G A T C G T A C A T G C A G C T A T C G
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.655
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif411.2
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets52.3 +/- 25.2bp
Average Position of motif in Background49.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CAGGGACCGA
NNNNTGCCAGTGATTG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGACCGA---
TCAGNGAGCGTGAC
A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A A C G T A C G T A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGACCGA---
NNTNAGGGGCGGNNNN
A C G T A C G T A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGGGACCGA--
--GAGSCCGAGC
A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGGACCGA
CCAGGAACAG-
A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGACCGA
CACAGN------
A C G T A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGACCGA----
NNTNNGGGGCGGNGNGN
A C G T A C G T A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A A C G T A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGACCGA
GGTTAGAGACCT-
A C G T A C G T A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGGGACCGA
GGGCGGGACC--
A C G T A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGACCGA-
TGAGTGACAGSC
A C G T A T G C C T G A A T C G C A T G C A T G T C G A A G T C T A G C T A C G G C T A A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C