Information for 1-CGCCGCACGTCTG (Motif 1)

G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G G T C A A G T C A C T G A C G T A C T G A T G C A C T G A C T G A G T C A C T G
p-value:1e-14
log p-value:-3.284e+01
Information Content per bp:1.875
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 25.8bp
Average Position of motif in Background50.9 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGCCGCACGTCTG
----GCACGTNC-
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGCCGCACGTCTG
----GCACGTAY-
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGCCGCACGTCTG-
----VBSYGTCTGG
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGCCGCACGTCTG
---BGCACGTA--
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCCGCACGTCTG-
----GCACGTACCC
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCACGTCTG
CCGCCCAAGGGCAG
 A C G T G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCACGTCTG
TCACCTCTGGGCAG
 A C G T G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CGCCGCACGTCTG-
------CTGTCTGG
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGCCGCACGTCTG
----GCACGTGT-
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCCGCACGTCTG
TGCCCCCGGGCA-
 G T A C A C T G A G T C A G T C A T C G A G T C T C G A A G T C A C T G A C G T A G T C A G C T A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T