Information for 4-CTCTCTGGACTCT (Motif 9)

A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
Reverse Opposite:
C G T A A T C G C T G A A C T G A C G T A G T C A G T C C G T A C T A G C G T A A C T G C G T A C T A G
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 27.6bp
Average Position of motif in Background60.0 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGGACTCT----
-NNATTGGACTTTNGNN
 A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTGGACTCT
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTGGACTCT-
TGGACTTTGNNCTNTG
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTGGACTCT
TGGACTTTGNNCTCN
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGGACTCT
-TGTCTAGACG--
 A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCTCTGGACTCT
TTCTNMGGAA---
 A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CTCTCTGGACTCT
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCTCTGGACTCT
CTGTCTGG-----
 A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCTCTGGACTCT
-GGTCTGGCAT--
 A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTGGACTCT
TGAACTCNATGAACTC-
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G C G T A A G T C A G C T A T G C A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C A C G T