Information for 6-TGAMTYTMTGTSA (Motif 17)

C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A
Reverse Opposite:
C G A T A T G C C G T A A G T C G T C A A C T G G C T A T C A G C G T A C A T G A G C T G T A C C G T A
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.624
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif6.76%
Number of Background Sequences with motif963.2
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets54.8 +/- 23.2bp
Average Position of motif in Background49.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TGAMTYTMTGTSA-
-------NTGTCAN
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TGAMTYTMTGTSA-
------CCTGTCAA
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGAMTYTMTGTSA-
------GCTGTCAA
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGAMTYTMTGTSA-
------RHTGWCAR
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGAMTYTMTGTSA
---ATCAAGGTCA
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGAMTYTMTGTSA---
--------TGTCANYT
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAMTYTMTGTSA------
TGACCTAAAGTAACCTCTG
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAMTYTMTGTSA-
TATAAGTAGGTCAA
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAMTYTMTGTSA
---AAYTAGGTCA
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGAMTYTMTGTSA--
-----VGCTGWCAVB
 C G A T C A T G T C G A G T A C G C A T A G T C C G A T T G A C C A G T A C T G C G A T A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C