Information for 1-GCTBCCATVGTGCMAG (Motif 1)

A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
Reverse Opposite:
A G T C C G A T C A G T A C T G A G T C T C G A A T G C A T C G C G T A A C G T A C T G C T A G T G C A C G T A A C T G G T A C
p-value:1e-18
log p-value:-4.271e+01
Information Content per bp:1.727
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 25.8bp
Average Position of motif in Background59.6 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTBCCATVGTGCMAG
GCNGCCATCTTG----
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTBCCATVGTGCMAG
GCCGCCATCTTG----
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTBCCATVGTGCMAG
ATTTCCCAGVAKSCY--
 A C G T A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTBCCATVGTGCMAG
-TTGGCATGGTGCCA-
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTBCCATVGTGCMAG
GCTTCC----------
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTBCCATVGTGCMAG
-NNNCCATTGTGTNAN
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTBCCATVGTGCMAG
-CTGGCAGNCTGCCA-
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCTBCCATVGTGCMAG
-----NATTGTGCAAT
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCTBCCATVGTGCMAG-
-TTGGCANNNTGCCAAG
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G A C G T
A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCTBCCATVGTGCMAG
-----NATGTTGCAA-
 A C T G A G T C A C G T A C G T A G T C G T A C C G T A C G A T T A G C T A C G A G C T A C T G G T A C G T C A C G T A T C A G
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T