Information for 11-GCTCCGACAG (Motif 22)

C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A G T C A C T G A C T G C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.410e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.4 +/- 17.7bp
Average Position of motif in Background45.7 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTCCGACAG
GCTCCG----
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCTCCGACAG-
-----CACAGN
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTCCGACAG
---TTGACAG
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCCGACAG-
---TTGACAGC
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTCCGACAG
--CCAGACAG
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGACAG-----
ATTTACGACAAATAGC
 A C G T C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTCCGACAG-
---TTGACAGG
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCCGACAG
--RHTGWCAR
 C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTCCGACAG----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTCCGACAG----
CAAATCCAGACATCACA
 A C G T A C G T A C G T C T A G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A