Information for 3-GGGAGGCCCCGCG (Motif 8)

C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
Reverse Opposite:
T A G C T A C G G T A C A C T G A T C G A C T G A C T G G T A C G A T C G A C T A T G C A G T C A G T C
p-value:1e-14
log p-value:-3.377e+01
Information Content per bp:1.773
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets53.6 +/- 20.9bp
Average Position of motif in Background43.1 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGCCCCGCG
GGGGGAATCCCC---
 A C G T A C G T C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGCCCCGCG
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGGCCCCGCG
AGGGGAATCCCCT--
 A C G T A C G T C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGCCCCGCG
AGGGGAATCCCCT--
 A C G T A C G T C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGAGGCCCCGCG---
--CAGGCCNNGGCCNN
 C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGAGGCCCCGCG
GGAAATCCCC---
 C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGGAGGCCCCGCG---
----GGCCCCGCCCCC
 C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGGAGGCCCCGCG
---AGGCCTAG--
 C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGAGGCCCCGCG
--GAGSCCGAGC-
 C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGCCCCGCG
GGGAAATCCCCN--
 A C G T C T A G C T A G A T C G C T G A C T A G A C T G A G T C A G T C T A G C T G A C A C T G A T G C A T C G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T