Information for 18-ATGGTACTTT (Motif 34)

T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T
Reverse Opposite:
T C G A T G C A C T G A A T C G C A G T T C G A T G A C G T A C C G T A A C G T
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.538
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets66.9 +/- 29.5bp
Average Position of motif in Background53.7 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATGGTACTTT----
NNATTGGACTTTNGNN
 A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:2
Score:0.63
Offset:-10
Orientation:forward strand
Alignment:----------ATGGTACTTT
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATGGTACTTT
ATTATGCTAATTT
 A C G T A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATGGTACTTT----
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATGGTACTTT--
--GGGAATTTCC
 T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T A C G T A C G T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGGTACTTT
TTATGCAAATTA
 A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGGTACTTT
TTATGCAAATTA
 A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGGTACTTT-
TATGCWAATBAV
 A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGGTACTTT
GAATGTTTGTTT
 A C G T A C G T T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGGTACTTT------
ATTGGACTTTGACCCC
 T C G A C G A T C A T G A C T G A G C T G T C A A T G C G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C