Information for 13-CTTCAAAGCT (Motif 29)

A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T
Reverse Opposite:
C T G A C A T G G T A C G A C T C A G T A C G T A T C G T C G A C T G A C T A G
p-value:1e-9
log p-value:-2.276e+01
Information Content per bp:1.682
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif106.8
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets51.3 +/- 26.6bp
Average Position of motif in Background45.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGCT
ACATCAAAGG-
 A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGCT
ACWTCAAAGG-
 A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAAGCT-
AAAGATCAAAGGAA
 A C G T A C G T A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTCAAAGCT-
CTTCACACCTA
 A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTTCAAAGCT--
-----AAGCTTG
 A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGCT-
ACATCAAAGGNA
 A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTCAAAGCT
GCTTCC-----
 A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTTCAAAGCT
CGGTTTCAAA---
 A C G T A C G T A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTTCAAAGCT---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTCAAAGCT----
GTATTGACAGCTNNTT
 A C G T A C G T A G T C G A C T A G C T T A G C T G C A G T C A C T G A A C T G G T A C A G C T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T