Information for 14-AGGCMTCTGGCGA (Motif 28)

C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A
Reverse Opposite:
A C G T A T G C T C A G A G T C A G T C G T C A A T C G G T C A C A G T A C T G A T G C A T G C A G C T
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.775
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 13.8bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGCMTCTGGCGA-
ATTGCCTGAGGCAAT
 A C G T C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCMTCTGGCGA
-NVCAGCTGBBNN
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGCMTCTGGCGA
-GCCATCTGTT--
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGCMTCTGGCGA
-AACATCTGGA--
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A
A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGCMTCTGGCGA
-GCCAGCTGBTNB
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGCMTCTGGCGA
-NGCCTGAGGCN-
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCMTCTGGCGA-
ATTGCCTGAGGCGAA
 A C G T C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGGCMTCTGGCGA-
--SCCTSAGGSCAW
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCMTCTGGCGA-
ATTCCCTGAGGGGAA
 A C G T C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGCMTCTGGCGA-
--GCCTCAGGGCAT
 C T G A T A C G A T C G A G T C G T C A A C G T A T G C A C G T A C T G A C T G A G T C A T C G C G T A A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T