Information for 1-AGTCAGAGTGAGG (Motif 2)

T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G
Reverse Opposite:
A G T C A G T C A G C T A G T C C G T A A G T C C G A T A T G C A C G T A C T G C T G A A G T C A G C T
p-value:1e-17
log p-value:-4.023e+01
Information Content per bp:1.757
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.7 +/- 27.3bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGTCAGAGTGAGG----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTCAGAGTGAGG---
WNAGTCADAVTGAAACTN
 A C G T A C G T T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAGAGTGAGG-
BAGTCATANTGAAAG
 A C G T T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTCAGAGTGAGG---
-NNVDGGGYGGGGCYN
 T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T A C G T A C G T
A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGTCAGAGTGAGG-
----GGGGNGGGGC
 T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGAGTGAGG----
RGGTCADNNAGAGGTCAV
 A C G T T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T A C G T A C G T A C G T
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTCAGAGTGAGG-
----TGGGTGGGGC
 T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

RARA::RXRA/MA0159.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGAGTGAGG---
AGGTCACGGAGAGGTCA
 A C G T T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T A C G T A C G T
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGTCAGAGTGAGG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGTCAGAGTGAGG--
----TGGGTGTGGCN
 T C G A T A C G A G C T G T A C C G T A A T C G C G T A A C T G G A C T A C T G T C G A T C A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C