Information for 7-TGGGCACTGCTGCCAG (Motif 7)

A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A C T G A G T C C G T A A C T G A G T C G T C A A C T G A C G T A C T G A G T C A G T C A G T C C G T A
p-value:1e-13
log p-value:-3.147e+01
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 23.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.55
Offset:9
Orientation:forward strand
Alignment:TGGGCACTGCTGCCAG-
---------TTGCCAAG
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCACTGCTGCCAG
NNNNTTGGGCACNNCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGGCACTGCTGCCAG-
-----GGTGYTGACAGS
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:TGGGCACTGCTGCCAG
----------TGCCAA
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:TGGGCACTGCTGCCAG-
--------CGTGCCAAG
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGGGCACTGCTGCCAG-
-------VGCTGWCAVB
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCACTGCTGCCAG
NGTGGGCAT---------
 A C G T A C G T A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGGGCACTGCTGCCAG
WDNCTGGGCA----------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:TGGGCACTGCTGCCAG--
---------CTGCCCGCA
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:TGGGCACTGCTGCCAG---
---------ATGCCAGACN
 A C G T A C T G A C T G T A C G A G T C G T C A T A G C A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C