Information for 25-GTGTCTGCTCAGAGTG (Motif 35)

A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A C G T A G T C A C G T A C T G C G T A A C T G G T A C C G T A A C T G C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.992e+00
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 22.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCTGCTCAGAGTG
NSTGTTTRCWCAGBNNN
 A C G T A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGTCTGCTCAGAGTG
VBSYGTCTGG--------
 A C G T A C G T A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGTCTGCTCAGAGTG
CTGTCTGG--------
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGTCTGCTCAGAGTG
------DCTCAGCAGG
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGTCTGCTCAGAGTG
-----TGCCCAGNHW-
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTGTCTGCTCAGAGTG
TWGTCTGV--------
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.50
Offset:9
Orientation:forward strand
Alignment:GTGTCTGCTCAGAGTG---
---------TTRAGTGSYK
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GTGTCTGCTCAGAGTG---
----GAGCACAGCAGGACA
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCTGCTCAGAGTG
NNGTATGTGCACATNNN-
 A C G T A C G T A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:GTGTCTGCTCAGAGTG
------GCAGTGATTT
 A C T G A C G T A C T G C G A T A G T C A C G T A C T G A G T C C G A T A G T C C G T A A C T G C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T