Information for 4-TAGGAGGAGC (Motif 2)

A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C
Reverse Opposite:
A C T G A G T C C A G T A G T C A G T C A G C T A G T C A G T C A C G T C G T A
p-value:1e-16
log p-value:-3.875e+01
Information Content per bp:1.903
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif81.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets53.0 +/- 22.3bp
Average Position of motif in Background48.9 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAGGAGGAGC
RGKGGGCGGAGC
 A C G T A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAGGAGGAGC-
-GGGAGGACNG
 A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAGGAGGAGC
GGAGGGGGAA-
 A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TAGGAGGAGC-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAGGAGGAGC--
AGGGGGCGGGGCTG
 A C G T A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAGGAGGAGC
----CGGAGC
 A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAGGAGGAGC
GGGGGCGGGGC
 A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGGAGGAGC--
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TAGGAGGAGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGGAGGAGC
GGGGNGGGGC
 A C G T C G T A A C T G A C T G C T G A A C T G C T A G G T C A C T A G A G T C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C