p-value: | 1e-9 |
log p-value: | -2.187e+01 |
Information Content per bp: | 1.773 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 5.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.6 +/- 18.2bp |
Average Position of motif in Background | 54.2 +/- 35.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0001.1_Arid3a_1/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ACGGTDTTTAATTAAA---- ---GGGTTTAATTAAAATTC |
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PH0100.1_Lmx1a/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --NNTTTTTAATTAATTCG |
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PH0101.1_Lmx1b/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACGGTDTTTAATTAAA--- --AGTTTTTAATTAATTTG |
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PH0095.1_Lhx5/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --ANNATTTAATTAATTNN |
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PH0091.1_Lhx1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --NNTTATTAATTAATNCN |
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PH0093.1_Lhx3/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --NNTATTTAATTAATTNN |
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PH0153.1_Prop1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --GNNTNTTAATTAATNCN |
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PH0069.1_Hoxc4/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --NNTNNTTAATTAATNCG |
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PH0173.1_Uncx/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACGGTDTTTAATTAAA--- --CATAATTAATTAACGCG |
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PH0059.1_Hoxb4/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGGTDTTTAATTAAA--- --GNTNATTAATTAACNNG |
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