Information for 7-GTGACCTGAC (Motif 11)

A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C
Reverse Opposite:
A C T G A C G T A T G C C T G A A T C G A C T G A C G T G T A C C T G A A T G C
p-value:1e-10
log p-value:-2.342e+01
Information Content per bp:1.833
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif130.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets48.7 +/- 27.0bp
Average Position of motif in Background47.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGAC
-TGACCTYA-
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGACCTGAC--
GTGACGTCACCG
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C A C G T A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTGACCTGAC
GTGACCTT--
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGAC
-TGACCT---
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGACCTGAC--
GTCACGTGACYV
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C A C G T A C G T
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTGACCTGAC--
GWAAYHTGABMC
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C A C G T A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

BHLHE41/MA0636.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTGACCTGAC
GTCACGTGAC
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGACCTGAC--
GTGGCGTGACNG
 A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGACCTGAC---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTGACCTGAC
GGTCACATGAC
 A C G T A T C G A G C T C A T G T G C A T G A C A T G C A G C T A T C G C G T A G T A C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C