Information for 3-ATGGTAAGAT (Motif 6)

G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T
Reverse Opposite:
C T G A C G A T G A T C A G C T A C G T C T G A A T G C A G T C G T C A A C G T
p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.847
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif50.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.9 +/- 25.4bp
Average Position of motif in Background54.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATGGTAAGAT-
CAGGTAAGTAT
 G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGGTAAGAT-
TATGCWAATBAV
 A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTAAGAT
AATGGAAAAT-
 A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGGTAAGAT----
AAGATAAGATAACA
 G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T A C G T A C G T A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTAAGAT
NATGGAAAAN-
 A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGGTAAGAT---
AGATGKDGAGATAAG
 A C G T A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGGTAAGAT---
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTAAGAT
AATGGAAAAT-
 A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTAAGAT
NVAGATAAGR-
 A C G T G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGGTAAGAT-
AGGGTAACAGC
 G T C A A C G T A C T G A T C G A G C T C G T A C T G A C A T G C G T A A G C T A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C