Information for 8-CGGCTCAGCC (Motif 16)

A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C G A C T T A C G C G T A A C T G A T G C T A G C T C A G
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.839
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif214.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets49.1 +/- 28.9bp
Average Position of motif in Background50.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGCTCAGCC
NGGATTAN--
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGCTCAGCC----
--GCTCCGCCCMCY
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGGCTCAGCC-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGGCTCAGCC--
--GCTCGGSCTC
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C A C G T A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGGCTCAGCC
-----CAGCC
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCTCAGCC
-GGATTAGC-
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGCTCAGCC---
-GGCCCCGCCCCC
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C A C G T A C G T A C G T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGCTCAGCC-
AGCCTCAGGCA
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTCAGCC-
ATGACTCAGCAD
 A C G T A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGCTCAGCC
TGACTCAGCA
 A G T C A T C G A T C G G T A C C G A T A T G C C T G A C T A G A T G C A G T C
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A