Information for 2-TCYSATTGGCYVNNNN (Motif 2)

A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
Reverse Opposite:
C T A G G A C T C T G A T C A G A T C G T C A G C T A G A G T C A T G C G T C A C G T A G C A T T A G C T C A G T A C G T G C A
p-value:1e-72
log p-value:-1.664e+02
Information Content per bp:1.559
Number of Target Sequences with motif171.0
Percentage of Target Sequences with motif18.06%
Number of Background Sequences with motif1539.1
Percentage of Background Sequences with motif3.28%
Average Position of motif in Targets53.2 +/- 26.0bp
Average Position of motif in Background48.6 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
-CCGATTGGCT-----
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
-CTGATTGGTCNATTT
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
--TGATTGGCTANN--
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----TCYSATTGGCYVNNNN
AGAGTGCTGATTGGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.75
Offset:5
Orientation:forward strand
Alignment:TCYSATTGGCYVNNNN
-----TTGGCA-----
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
-TTGATTGN-------
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
----NTTGGCANN---
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
-NTAATTGG-------
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCYSATTGGCYVNNNN
-NTAATTGG-------
 A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCYSATTGGCYVNNNN
ACTCCTAATTAGTCGT---
 A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A T C G A C T G G A T C A G T C T A G C A G T C G A C T C T G A G A C T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T A C G T A C G T A C G T