Information for 13-GCTTAATCGTAAC (Motif 16)

A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T G C A T C T G A G T A C C T A G C G T A A C G T A G C T C G T A G T C A A C T G G T A C
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.762
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 28.1bp
Average Position of motif in Background82.9 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTTAATCGTAAC
--TTAATCCT---
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTTAATCGTAAC
--TTAATCCG---
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTTAATCGTAAC
--CTAATCGNT--
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTTAATCGTAAC--
-NNTAATCCNGNCNN
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTTAATCGTAAC
--YTAATCCY---
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTTAATCGTAAC
-NYTAATCCYB--
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTTAATCGTAAC
--TTAATCCC---
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTTAATCGTAAC
-CCTAATCCGC--
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTTAATCGTAAC--
-NTTATTCGTCATNC
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C A C G T A C G T
A C G T C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTTAATCGTAAC
-CTTAATCCC---
 A C T G A G T C A C G T C G A T T C G A G T C A G C A T A G T C A C T G A G C T C G T A C T G A A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T