Information for 1-CCTAWHAAACAYATRG (Motif 1)

G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
Reverse Opposite:
T G A C A G C T C G T A C G A T C T G A A C G T A C T G G A C T A C G T A C G T C G A T G C A T A C G T C G T A C T A G A C T G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.667
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets65.1 +/- 19.7bp
Average Position of motif in Background47.4 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE23/MA0817.1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCTAWHAAACAYATRG--
------AAACATATGTTT
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTAWHAAACAYATRG
CCYMATAAAA-------
 A C G T G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTAWHAAACAYATRG
CCAATAAAAC------
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTAWHAAACAYATRG
--AAACAAACATTC--
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CCTAWHAAACAYATRG-
-------AACATATGTT
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTAWHAAACAYATRG
NNNTAACAATTATAN--
 A C G T G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTAWHAAACAYATRG
GCCATAAATCA-----
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTAWHAAACAYATRG
AAATAAGAAAAAAC---
 A C G T G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CCTAWHAAACAYATRG-
-------NACATATGGN
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTAWHAAACAYATRG
CCAATAAAAA------
 G T A C G A T C C G A T C G T A C G T A G C T A G T C A C G T A C T G A G T A C C G T A G A C T C G T A C G A T T C G A A C T G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T