p-value: | 1e-9 |
log p-value: | -2.096e+01 |
Information Content per bp: | 1.944 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.53% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 60.2 +/- 23.3bp |
Average Position of motif in Background | 71.9 +/- 5.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.20 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTCCAGACCCGCGCT ---CCAGACRSVB--- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTCCAGACCCGCGCT ---CCAGACAG----- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTCCAGACCCGCGCT ATGCCAGACN------ |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCTCCAGACCCGCGCT CAAATCCAGACATCACA- |
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PB0095.1_Zfp161_1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTCCAGACCCGCGCT--- ---NCANGCGCGCGCGCCA |
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EGR1/MA0162.2/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTCCAGACCCGCGCT CCCCCGCCCCCGCC-- |
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POL011.1_XCPE1/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCTCCAGACCCGCGCT -----GGTCCCGCCC- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTCCAGACCCGCGCT AGCAACAGCCGCACC-- |
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ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.49 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTCCAGACCCGCGCT NGNTCTAGAACCNGV-- |
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POL003.1_GC-box/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCTCCAGACCCGCGCT-- ----NAGCCCCGCCCCCN |
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