Information for 9-GGAAATTACACAA (Motif 8)

A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G A C G T T A C G A C G T G T C A C T G A A G C T C G A T A C G T A G T C A T G C
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.809
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.4 +/- 15.1bp
Average Position of motif in Background60.5 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAAATTACACAA
GGAAATTCCC---
 A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAAATTACACAA
GGAAATTCCC---
 A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGAAATTACACAA
AACAAGGAAGTAA-----
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAAATTACACAA
CGGAAGTGAAAC--
 A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGAAATTACACAA-
NNNGTAATTACNNATA
 A C G T A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTACACAA
NNTGGAAANN------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATTACACAA
NACAGGAAAT-------
 A C G T A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAAATTACACAA
GGAAANCCCC---
 A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTACACAA
AATGGAAAAT------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTACACAA
DCCGGAARYN------
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A A G C T A C G T T G C A A T G C G T C A G T A C C G T A G T C A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T