Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-48 | -1.108e+02 | 0.0000 | 71.0 | 9.74% | 430.4 | 0.90% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-39 | -9.190e+01 | 0.0000 | 193.0 | 26.47% | 4477.7 | 9.34% | motif file (matrix) |
svg |
3 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-30 | -7.008e+01 | 0.0000 | 83.0 | 11.39% | 1144.2 | 2.39% | motif file (matrix) |
svg |
4 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-30 | -6.945e+01 | 0.0000 | 113.0 | 15.50% | 2103.7 | 4.39% | motif file (matrix) |
svg |
5 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-27 | -6.418e+01 | 0.0000 | 82.0 | 11.25% | 1220.2 | 2.54% | motif file (matrix) |
svg |
6 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-23 | -5.407e+01 | 0.0000 | 156.0 | 21.40% | 4315.7 | 9.00% | motif file (matrix) |
svg |
7 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-22 | -5.073e+01 | 0.0000 | 147.0 | 20.16% | 4064.8 | 8.48% | motif file (matrix) |
svg |
8 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-19 | -4.597e+01 | 0.0000 | 54.0 | 7.41% | 739.4 | 1.54% | motif file (matrix) |
svg |
9 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-18 | -4.372e+01 | 0.0000 | 105.0 | 14.40% | 2576.6 | 5.37% | motif file (matrix) |
svg |
10 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-18 | -4.321e+01 | 0.0000 | 82.0 | 11.25% | 1710.3 | 3.57% | motif file (matrix) |
svg |
11 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.313e+01 | 0.0000 | 68.0 | 9.33% | 1225.9 | 2.56% | motif file (matrix) |
svg |
12 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-18 | -4.299e+01 | 0.0000 | 63.0 | 8.64% | 1066.2 | 2.22% | motif file (matrix) |
svg |
13 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-17 | -4.065e+01 | 0.0000 | 80.0 | 10.97% | 1713.0 | 3.57% | motif file (matrix) |
svg |
14 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-15 | -3.620e+01 | 0.0000 | 82.0 | 11.25% | 1934.5 | 4.03% | motif file (matrix) |
svg |
15 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-15 | -3.520e+01 | 0.0000 | 83.0 | 11.39% | 2009.2 | 4.19% | motif file (matrix) |
svg |
16 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-14 | -3.243e+01 | 0.0000 | 285.0 | 39.09% | 12473.5 | 26.02% | motif file (matrix) |
svg |
17 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-13 | -3.148e+01 | 0.0000 | 109.0 | 14.95% | 3276.6 | 6.83% | motif file (matrix) |
svg |
18 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-13 | -3.083e+01 | 0.0000 | 214.0 | 29.36% | 8610.1 | 17.96% | motif file (matrix) |
svg |
19 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-11 | -2.622e+01 | 0.0000 | 147.0 | 20.16% | 5436.6 | 11.34% | motif file (matrix) |
svg |
20 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.262e+01 | 0.0000 | 67.0 | 9.19% | 1861.2 | 3.88% | motif file (matrix) |
svg |
21 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-9 | -2.233e+01 | 0.0000 | 150.0 | 20.58% | 5898.9 | 12.30% | motif file (matrix) |
svg |
22 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-9 | -2.161e+01 | 0.0000 | 72.0 | 9.88% | 2126.2 | 4.43% | motif file (matrix) |
svg |
23 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.969e+01 | 0.0000 | 36.0 | 4.94% | 746.7 | 1.56% | motif file (matrix) |
svg |
24 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-8 | -1.921e+01 | 0.0000 | 100.0 | 13.72% | 3586.5 | 7.48% | motif file (matrix) |
svg |
25 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-8 | -1.877e+01 | 0.0000 | 49.0 | 6.72% | 1277.4 | 2.66% | motif file (matrix) |
svg |
26 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-7 | -1.794e+01 | 0.0000 | 15.0 | 2.06% | 148.8 | 0.31% | motif file (matrix) |
svg |
27 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.462e+01 | 0.0000 | 65.0 | 8.92% | 2203.6 | 4.60% | motif file (matrix) |
svg |
28 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-6 | -1.397e+01 | 0.0000 | 81.0 | 11.11% | 3032.4 | 6.32% | motif file (matrix) |
svg |
29 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.342e+01 | 0.0000 | 80.0 | 10.97% | 3026.1 | 6.31% | motif file (matrix) |
svg |
30 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.185e+01 | 0.0001 | 61.0 | 8.37% | 2202.5 | 4.59% | motif file (matrix) |
svg |
31 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.178e+01 | 0.0001 | 53.0 | 7.27% | 1820.2 | 3.80% | motif file (matrix) |
svg |
32 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-4 | -1.090e+01 | 0.0002 | 90.0 | 12.35% | 3775.3 | 7.87% | motif file (matrix) |
svg |
33 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.079e+01 | 0.0002 | 55.0 | 7.54% | 1986.1 | 4.14% | motif file (matrix) |
svg |
34 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-4 | -1.035e+01 | 0.0003 | 47.0 | 6.45% | 1631.0 | 3.40% | motif file (matrix) |
svg |
35 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-4 | -9.579e+00 | 0.0007 | 96.0 | 13.17% | 4244.5 | 8.85% | motif file (matrix) |
svg |
36 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-4 | -9.576e+00 | 0.0007 | 77.0 | 10.56% | 3218.9 | 6.71% | motif file (matrix) |
svg |
37 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-4 | -9.561e+00 | 0.0007 | 83.0 | 11.39% | 3540.1 | 7.38% | motif file (matrix) |
svg |
38 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-4 | -9.406e+00 | 0.0008 | 45.0 | 6.17% | 1600.7 | 3.34% | motif file (matrix) |
svg |
39 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.931e+00 | 0.0012 | 60.0 | 8.23% | 2390.0 | 4.98% | motif file (matrix) |
svg |
40 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.909e+00 | 0.0012 | 21.0 | 2.88% | 545.3 | 1.14% | motif file (matrix) |
svg |
41 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-3 | -8.810e+00 | 0.0013 | 40.0 | 5.49% | 1401.6 | 2.92% | motif file (matrix) |
svg |
42 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.583e+00 | 0.0016 | 36.0 | 4.94% | 1226.5 | 2.56% | motif file (matrix) |
svg |
43 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.339e+00 | 0.0020 | 129.0 | 17.70% | 6274.5 | 13.09% | motif file (matrix) |
svg |
44 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.072e+00 | 0.0026 | 32.0 | 4.39% | 1071.7 | 2.24% | motif file (matrix) |
svg |
45 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.043e+00 | 0.0026 | 46.0 | 6.31% | 1754.9 | 3.66% | motif file (matrix) |
svg |
46 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.931e+00 | 0.0028 | 55.0 | 7.54% | 2224.7 | 4.64% | motif file (matrix) |
svg |
47 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.765e+00 | 0.0033 | 19.0 | 2.61% | 511.1 | 1.07% | motif file (matrix) |
svg |
48 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.756e+00 | 0.0033 | 15.0 | 2.06% | 352.5 | 0.74% | motif file (matrix) |
svg |
49 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.621e+00 | 0.0036 | 31.0 | 4.25% | 1053.4 | 2.20% | motif file (matrix) |
svg |
50 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-3 | -7.518e+00 | 0.0040 | 84.0 | 11.52% | 3834.5 | 8.00% | motif file (matrix) |
svg |
51 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -7.446e+00 | 0.0042 | 34.0 | 4.66% | 1208.7 | 2.52% | motif file (matrix) |
svg |
52 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -7.125e+00 | 0.0056 | 21.0 | 2.88% | 627.0 | 1.31% | motif file (matrix) |
svg |
53 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -6.947e+00 | 0.0066 | 9.0 | 1.23% | 161.8 | 0.34% | motif file (matrix) |
svg |
54 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -6.944e+00 | 0.0066 | 12.0 | 1.65% | 266.2 | 0.56% | motif file (matrix) |
svg |
55 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-3 | -6.933e+00 | 0.0066 | 51.0 | 7.00% | 2112.5 | 4.41% | motif file (matrix) |
svg |
56 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.860e+00 | 0.0068 | 77.0 | 10.56% | 3530.2 | 7.36% | motif file (matrix) |
svg |
57 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.488e+00 | 0.0097 | 25.0 | 3.43% | 844.3 | 1.76% | motif file (matrix) |
svg |
58 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -6.481e+00 | 0.0097 | 47.0 | 6.45% | 1947.2 | 4.06% | motif file (matrix) |
svg |
59 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -6.477e+00 | 0.0097 | 58.0 | 7.96% | 2534.1 | 5.29% | motif file (matrix) |
svg |
60 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.385e+00 | 0.0102 | 67.0 | 9.19% | 3037.6 | 6.34% | motif file (matrix) |
svg |
61 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.179e+00 | 0.0124 | 103.0 | 14.13% | 5111.6 | 10.66% | motif file (matrix) |
svg |
62 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -6.007e+00 | 0.0144 | 5.0 | 0.69% | 60.5 | 0.13% | motif file (matrix) |
svg |
63 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.990e+00 | 0.0145 | 65.0 | 8.92% | 2977.0 | 6.21% | motif file (matrix) |
svg |
64 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.912e+00 | 0.0154 | 55.0 | 7.54% | 2437.5 | 5.08% | motif file (matrix) |
svg |
65 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -5.720e+00 | 0.0184 | 111.0 | 15.23% | 5659.6 | 11.80% | motif file (matrix) |
svg |
66 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.605e+00 | 0.0203 | 40.0 | 5.49% | 1667.6 | 3.48% | motif file (matrix) |
svg |
67 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.592e+00 | 0.0203 | 32.0 | 4.39% | 1254.5 | 2.62% | motif file (matrix) |
svg |
68 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.477e+00 | 0.0224 | 223.0 | 30.59% | 12546.2 | 26.17% | motif file (matrix) |
svg |
69 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.421e+00 | 0.0233 | 77.0 | 10.56% | 3734.9 | 7.79% | motif file (matrix) |
svg |
70 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.098e+00 | 0.0318 | 55.0 | 7.54% | 2539.7 | 5.30% | motif file (matrix) |
svg |
71 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.075e+00 | 0.0320 | 5.0 | 0.69% | 75.4 | 0.16% | motif file (matrix) |
svg |
72 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-2 | -5.068e+00 | 0.0320 | 17.0 | 2.33% | 559.8 | 1.17% | motif file (matrix) |
svg |
73 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -4.982e+00 | 0.0342 | 16.0 | 2.19% | 518.5 | 1.08% | motif file (matrix) |
svg |
74 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -4.949e+00 | 0.0349 | 101.0 | 13.85% | 5213.2 | 10.87% | motif file (matrix) |
svg |
75 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-2 | -4.941e+00 | 0.0349 | 124.0 | 17.01% | 6587.8 | 13.74% | motif file (matrix) |
svg |
76 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -4.912e+00 | 0.0352 | 52.0 | 7.13% | 2397.5 | 5.00% | motif file (matrix) |
svg |
77 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -4.803e+00 | 0.0388 | 26.0 | 3.57% | 1017.0 | 2.12% | motif file (matrix) |
svg |
78 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -4.757e+00 | 0.0401 | 43.0 | 5.90% | 1921.3 | 4.01% | motif file (matrix) |
svg |
79 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.731e+00 | 0.0406 | 48.0 | 6.58% | 2199.2 | 4.59% | motif file (matrix) |
svg |
80 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.643e+00 | 0.0438 | 38.0 | 5.21% | 1663.9 | 3.47% | motif file (matrix) |
svg |
81 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -4.630e+00 | 0.0439 | 25.0 | 3.43% | 981.2 | 2.05% | motif file (matrix) |
svg |