Information for 6-AACAGAGCCACCA (Motif 9)

C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C T G A C T G A G T C G A C T A G T C A C G T A C T G A C G T A C G T
p-value:1e-13
log p-value:-3.173e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 27.2bp
Average Position of motif in Background37.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACAGAGCCACCA
-ACAAAGGNBCCT
 C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACAGAGCCACCA
AGCAACAGCCGCACC-
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGCCACCA
VRRACAAWGG-----
 A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGCCACCA
GGAACAAAGR-----
 A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AACAGAGCCACCA
-ACAAAG------
 C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AACAGAGCCACCA-
TACCATAGCAACGGT
 A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGCCACCA
AGAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGCCACCA
ATAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------AACAGAGCCACCA
AACACCAAAACAAAGGA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGCCACCA
AAAACAAAGG-----
 A C G T A C G T C G T A C G T A A G T C C G T A C T A G C G T A A C T G A G T C G T A C C G T A A G T C G T A C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T