Information for 7-CAYTGTTAWACAWCAT (Motif 8)

G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
Reverse Opposite:
C G T A C A G T C T A G G C A T A C G T A T C G C A G T G C A T C G A T G C T A C G T A G A T C C T G A T C G A A C G T C A T G
p-value:1e-14
log p-value:-3.234e+01
Information Content per bp:1.718
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.8 +/- 24.3bp
Average Position of motif in Background47.5 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAYTGTTAWACAWCAT
CCATTGTTYB-------
 A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAYTGTTAWACAWCAT
-ATTGTTTAN------
 G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAYTGTTAWACAWCAT
-ATTGTTA--------
 G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAYTGTTAWACAWCAT
TTCAATTGTTCTAAAA---
 A C G T A C G T A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAYTGTTAWACAWCAT
CCATTGTTC--------
 A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAYTGTTAWACAWCAT
CTTTGT----------
 G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAYTGTTAWACAWCAT
CTCATTGTC---------
 A C G T A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CAYTGTTAWACAWCAT
ANNTCCATTGTTCNNN-----
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAYTGTTAWACAWCAT
NCCATTGTTY--------
 A C G T A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAYTGTTAWACAWCAT
NNNCCATTGTGTNAN-----
 A C G T A C G T A C G T A C G T G A T C C G T A A G C T A G C T C T A G C G A T C G A T C G T A C G T A G T C A A T G C C G T A C G A T G A T C G T C A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T A C G T