Information for 5-CWCASTCATTAGCATT (Motif 5)

G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T
Reverse Opposite:
G C T A C G T A A C G T A C T G A G T C C G A T C T G A G T C A A C G T A T C G C G T A A T G C C A G T T A C G C G A T C T A G
p-value:1e-18
log p-value:-4.295e+01
Information Content per bp:1.673
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif48.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets42.7 +/- 26.2bp
Average Position of motif in Background49.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT
----CTCATTTGCATW
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T
A C G T A C G T A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT
----BTVATTWGCATA
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T
A C G T A C G T A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU1F1/MA0784.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT--
----CTAATTTGCATATT
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT-
-----TAATTTGCATAA
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT-
-----TAATTTGCATAA
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT---
---TNTAATTTGCATANNN
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT---
---TNTAATTTGCATACNA
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT---
---TNTAATTTGCATACNA
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:CWCASTCATTAGCATT
-------ATTTGCATA
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CWCASTCATTAGCATT-
----TTCATTTGCATAT
 G A T C G C T A A G T C G C T A A T C G C G A T A T G C C G T A A C G T G A C T C G T A T A C G G T A C G T C A G C A T C G A T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T