Information for 25-TTGAGYATTACYA (Motif 38)

A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
Reverse Opposite:
A C G T C T G A A C T G A G C T C G T A C G T A A C G T C T G A A T G C A C G T A G T C C G T A C G T A
p-value:1e-3
log p-value:-9.077e+00
Information Content per bp:1.910
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 29.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGAGYATTACYA
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGAGYATTACYA
NNTGTGGATTSS--
 A C G T A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGAGYATTACYA-
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

CEBPG/MA0838.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGYATTACYA
ATTGCGCAAT----
 A C G T A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGAGYATTACYA
-TGTGGATTNNN-
 A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGAGYATTACYA
--NGGGATTA---
 A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGYATTACYA
GTTGCGCAAT----
 A C G T A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTGAGYATTACYA
GGTTAAACATTAA--
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTGAGYATTACYA
--GNGGATTAGN-
 A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTGAGYATTACYA
--NNGGATTAGN-
 A C G T A C G T A C T G C G T A A T C G A G C T C G T A A C G T A C G T C T G A A G T C A G C T T C G A
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T