Information for 14-CKTTAAAGAG (Motif 35)

A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G
Reverse Opposite:
A T G C C G A T A G T C C G A T C G A T A C G T C T G A C T G A G T A C T A C G
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.668
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif300.8
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets49.0 +/- 27.5bp
Average Position of motif in Background48.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CKTTAAAGAG-
--NTCAAGTGG
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CKTTAAAGAG-----
NANTTTCAAGTGGTTAN
 A C G T A C G T A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CKTTAAAGAG--
--NTAATGAGCT
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CKTTAAAGAG
NTTTTACGAC
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CKTTAAAGAG--
--NTCAAGTGGN
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CKTTAAAGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CKTTAAAGAG--
--CTYRAGTGSY
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CKTTAAAGAG-
ANTTTTACGACC
 A C G T A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CKTTAAAGAG
-ATTAAA---
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CKTTAAAGAG
-GKTAATGR-
 A T G C C A T G A G C T A G C T G T C A C G T A C G T A C T A G C G T A T A C G
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T