Information for 17-YCTCTCAGYCAYW (Motif 30)

A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
Reverse Opposite:
C G A T C T G A A C G T A C T G C T A G A G T C A C G T A C T G C T G A A C T G C G T A A C T G C T A G
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 26.7bp
Average Position of motif in Background23.3 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-YCTCTCAGYCAYW
GSCTGTCACTCA--
 A C G T A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YCTCTCAGYCAYW
NCTGTCAATCAN-
 A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---YCTCTCAGYCAYW
ACCACTCTCGGTCAC-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YCTCTCAGYCAYW
SCTGTCAVTCAV-
 A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YCTCTCAGYCAYW
AGCCACTCAAG----
 A C G T A C G T A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YCTCTCAGYCAYW-
---NTGAGTCATCN
 A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A A C G T
A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---YCTCTCAGYCAYW
AGTATTCTCGGTTGC-
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YCTCTCAGYCAYW-
---ATGAGTCATCN
 A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A A C G T
A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:YCTCTCAGYCAYW
----TGAGTCA--
 A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:YCTCTCAGYCAYW
----BCAGACWA-
 A G T C A G T C A C G T A G T C A G C T A G T C C G T A A C T G A G T C A G T C C G T A A G C T C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T