Information for 20-AGCACTGCATTCATTC (Motif 29)

C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
Reverse Opposite:
A C T G G C T A T C G A C G A T C A T G T G C A C G T A C A G T A T C G A T G C C G T A A T C G C G A T A C T G G T A C A G C T
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.689
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets51.1 +/- 22.1bp
Average Position of motif in Background45.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AGCACTGCATTCATTC
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AGCACTGCATTCATTC
NNNNTGAGCACTGTNNG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCACTGCATTCATTC
AACACTGCAATTGTTC
 C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCACTGCATTCATTC
NSCACTYVAV------
 C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCACTGCATTCATTC
AASCACTCAA-------
 A C G T C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCACTGCATTCATTC
AAATCACTGC--------
 A C G T A C G T C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCACTGCATTCATTC
RSCACTYRAG------
 C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCACTGCATTCATTC-
-GGACTGAATTCATGCC
 C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-11
Orientation:reverse strand
Alignment:-----------AGCACTGCATTCATTC
TGGCCANNNNNGGAACTGCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCACTGCATTCATTC
AACACTGAAATTGTT-
 C T G A A C T G G T A C G C T A A T G C A C G T A T C G A T G C G T C A A C G T A C G T G T A C C G T A A C G T C A G T G T A C
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T