Information for 11-CCCAYTAGRC (Motif 27)

T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C
Reverse Opposite:
C A T G G A T C A G T C A C G T C T G A C T A G A C G T T A C G C A T G A C T G
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.636
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif49.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets55.5 +/- 25.8bp
Average Position of motif in Background49.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCCAYTAGRC
BCMATTAG--
 T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCCAYTAGRC
ACCGATTAG--
 A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCAYTAGRC-
TGCCCCCGGGCA
 A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCAYTAGRC----
TATCATTAGAACGCT
 A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCAYTAGRC
GCAATTAG--
 T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCAYTAGRC
AAACMATTAN--
 A C G T A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCAYTAGRC-
TGCCCCAGGGCA
 A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C A C G T
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCAYTAGRC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCAYTAGRC
CCAATTAA--
 T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCAYTAGRC-------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T T G A C G T A C A T G C T G C A G A T C G A C T G T C A C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A