Information for 13-GCWCAATGGCACT (Motif 22)

A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
Reverse Opposite:
C G T A A C T G A C G T A C T G A G T C A G T C G C T A C G A T A C G T A T C G C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.321e+01
Information Content per bp:1.800
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets71.8 +/- 15.5bp
Average Position of motif in Background42.8 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCWCAATGGCACT
CCGCCCAAGGGCAG-
 A C G T A C G T A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCWCAATGGCACT
AGGTCAAGGTCA--
 A C G T A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCWCAATGGCACT
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCWCAATGGCACT
AGGTCAAGGTCA--
 A C G T A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCWCAATGGCACT
---CAAGGHCANV
 A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCWCAATGGCACT
GAACAATGGN---
 A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCWCAATGGCACT
-BTCAAGGTCA--
 A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCWCAATGGCACT
--TCAAGGTCAN-
 A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCWCAATGGCACT
--TCAAGGTCAT-
 A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCWCAATGGCACT
-NTCAAGGTCA--
 A C T G G T A C C G A T A T G C C G T A C G T A C A G T A C T G C T A G A G T C C G T A T G A C C G A T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T