Information for 16-CTCTTTATTGTCTGAC (Motif 19)

A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
Reverse Opposite:
C A T G C A G T A G T C C G T A A C T G C T G A A G T C C G T A C G T A A C G T T G C A T C G A C G T A C T A G C T G A A C T G
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.1 +/- 18.6bp
Average Position of motif in Background55.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTCTTTATTGTCTGAC
---CTCATTGTC----
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC
-NNNCCATTGTGTNAN
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC
------ATTGTTTAN-
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC
-TTTTTATTGG-----
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CTCTTTATTGTCTGAC
-------TWGTCTGV-
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC--
-CNNNTATTGTTCNNNNN
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC
---NCCATTGTTY---
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTCTTTATTGTCTGAC
------ATTGTTA---
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC-
ANNTCTATTGTTCNNNA
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCTTTATTGTCTGAC----
---NNTNNTGTCTGGNNTNG
 A G T C A G C T A G T C G A C T A G C T A C G T C G T A A C G T C G A T C T A G A G C T T A G C C G A T T C A G G C T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G