Information for 15-TGGCAGGATGTTCMCC (Motif 18)

A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
Reverse Opposite:
A C T G C T A G A C G T A C T G C T G A C G T A G A T C G T C A G A C T A T G C A G T C C G A T A T C G G A T C A G T C C G T A
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.724
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.2 +/- 25.5bp
Average Position of motif in Background37.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGGCAGGATGTTCMCC-
----AGGGGAATCCCCT
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGGCAGGATGTTCMCC-
----AGGGGATTCCCCT
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAGGATGTTCMCC
CTACTAGGATGTNNTN-
 A C G T A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGGCAGGATGTTCMCC-
-----GGGGATTCCCCC
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGCAGGATGTTCMCC
-AACAGGAAGT-----
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGCAGGATGTTCMCC
-ANCAGGATGT-----
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGGCAGGATGTTCMCC
-----GGAAATTCCC-
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGGATGTTCMCC
TTGCCAAG---------
 A C G T A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGGATGTTCMCC
TTGACAGC---------
 A C G T A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGCAGGATGTTCMCC
--ACAGGAAGTG----
 A C G T C T A G C A T G A T G C C G T A C T A G A T C G C T G A C A G T C A T G A C G T A G C T G T A C G T C A A G T C A G T C
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T