Information for 14-SKAAAWSAAACAGMAM (Motif 17)

A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A T C G C G A T A C G T A C G T A C G T G T A C A T G C
p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 23.6bp
Average Position of motif in Background51.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:SKAAAWSAAACAGMAM
---AAATAAACA----
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--SKAAAWSAAACAGMAM
TGCCAAAATAAACANN--
 A C G T A C G T A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-SKAAAWSAAACAGMAM
GGAAANTGAAACTNA--
 A C G T A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:SKAAAWSAAACAGMAM------
-AAANNGAAAGTGAAAGTAAAN
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SKAAAWSAAACAGMAM
---AAACAAACATTC-
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:SKAAAWSAAACAGMAM
GAAAMTGAAACT----
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SKAAAWSAAACAGMAM
--AAAGTAAACA----
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SKAAAWSAAACAGMAM
--AAAGTAAACA----
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SKAAAWSAAACAGMAM--
---AACGAAACCGAAACT
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SKAAAWSAAACAGMAM
CAAAAGTAAACAAAG-
 A T C G A C T G C G T A C G T A C G T A C G T A A T G C C G T A C G T A C G T A A G T C C G T A A C T G G T A C C G T A G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T