Information for 11-GCCCTYTCAAATGGGR (Motif 14)

C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
Reverse Opposite:
A G C T G A T C A G T C G A T C C G T A C A G T A G C T A C G T A C T G C G T A T C G A C G T A C T A G A T C G A T C G A G T C
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 25.5bp
Average Position of motif in Background66.6 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCCTYTCAAATGGGR
--GCTGTCAA------
 C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCTYTCAAATGGGR
--CCTGTCAA------
 C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCCTYTCAAATGGGR
AAGCACCTGTCAATAT---
 A C G T A C G T A C G T C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCCTYTCAAATGGGR
AAAGACCTGTCAATAC---
 A C G T A C G T A C G T C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCCTYTCAAATGGGR--
-NANTTTCAAGTGGTTAN
 C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A A C G T A C G T
A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCCCTYTCAAATGGGR
AAAGACCTGTCAATCC---
 A C G T A C G T A C G T C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCCTYTCAAATGGGR
AGCCACTCAAG-----
 C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCCTYTCAAATGGGR
AACGAGCTGTCAATAC---
 A C G T A C G T A C G T C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCCTYTCAAATGGGR
--CCTTTGATGT----
 C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCCTYTCAAATGGGR
AATTACCTGTCAATAC---
 A C G T A C G T A C G T C T A G T A G C T A G C G A T C C G A T A G C T C G A T A G T C C G T A C T G A G C T A A C G T C A T G C T A G C T A G T C G A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T A C G T