p-value: | 1e-11 |
log p-value: | -2.687e+01 |
Information Content per bp: | 1.665 |
Number of Target Sequences with motif | 51.0 |
Percentage of Target Sequences with motif | 7.00% |
Number of Background Sequences with motif | 1071.2 |
Percentage of Background Sequences with motif | 2.23% |
Average Position of motif in Targets | 52.2 +/- 26.8bp |
Average Position of motif in Background | 49.9 +/- 31.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTGCTTAGC TTAAGTGCTT--- |
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PB0099.1_Zfp691_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AGTGCTTAGC-- CGAACAGTGCTCACTAT |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGTGCTTAGC TTRAGTGSYK--- |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AGTGCTTAGC- CTTTAAGTACTTAATG |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AGTGCTTAGC-- TACTAAGTACTTAAATG |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGTGCTTAGC --GGATTAGC |
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NRL/MA0842.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTGCTTAGC AATTTGCTGAC- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTGCTTAGC TTGAGTGSTT--- |
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FOXP3/MA0850.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGTGCTTAGC --TGTTTAC- |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------AGTGCTTAGC NTNNTTAAGTGGTTANN |
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